BioCMAMC-ST
Simulation::ScalarSimulation Member List

This is the complete list of members for Simulation::ScalarSimulation, including all inherited members.

clearNegs()Simulation::ScalarSimulation
concentration_float_type typedefSimulation::ScalarSimulation
concentration_t typedefSimulation::ScalarSimulationprivate
concentration_view_t typedefSimulation::ScalarSimulation
concentrationsSimulation::ScalarSimulationprivate
contribsSimulation::ScalarSimulationprivate
contribution_span() constSimulation::ScalarSimulationinline
contribution_span_mut()Simulation::ScalarSimulationinline
deep_copy_concentration(const std::vector< concentration_float_type > &data)Simulation::ScalarSimulation
get_concentration() noexceptSimulation::ScalarSimulation
get_device_concentration() constSimulation::ScalarSimulation
get_kernel_contribution() constSimulation::ScalarSimulationinline
getConcentrationArray() constSimulation::ScalarSimulationinline
getConcentrationData()Simulation::ScalarSimulationinline
getConcentrationData() constSimulation::ScalarSimulationinline
getVolume() const noexceptSimulation::ScalarSimulationinline
m_transitionSimulation::ScalarSimulationprivate
m_volumesSimulation::ScalarSimulationprivate
n_cSimulation::ScalarSimulationprivate
n_col() const noexceptSimulation::ScalarSimulation
n_rSimulation::ScalarSimulationprivate
n_row() const noexceptSimulation::ScalarSimulation
operator=(const ScalarSimulation &other)=deleteSimulation::ScalarSimulation
operator=(ScalarSimulation &&other)=deleteSimulation::ScalarSimulation
performStep(double d_t)Simulation::ScalarSimulation
performStepGL(double d_t, const KokkosEigen::Alias::ColMajorMatrixtype< mass_balance_float_type > &mtr, MassTransfer::Sign sign)Simulation::ScalarSimulation
ScalarSimulation(size_t n_compartments, size_t n_species, std::span< mass_balance_float_type > volume)Simulation::ScalarSimulation
ScalarSimulation(ScalarSimulation &&other) noexcept=deleteSimulation::ScalarSimulation
ScalarSimulation(const ScalarSimulation &other) noexcept=deleteSimulation::ScalarSimulation
set_feed(std::uint64_t i_r, std::uint64_t i_c, double val)Simulation::ScalarSimulationinline
set_mass()Simulation::ScalarSimulation
set_sink(std::uint64_t i_compartment, double val)Simulation::ScalarSimulationinline
set_transition(CmaUtils::StateCooMatrixType &&transition)Simulation::ScalarSimulation
set_zero_contribs()Simulation::ScalarSimulationinline
setVolumes(std::span< const double > volumes, std::span< const double > inv_volumes)Simulation::ScalarSimulationinline
sinkSimulation::ScalarSimulationprivate
sourcesSimulation::ScalarSimulationprivate
synchro_sources()Simulation::ScalarSimulation
total_massSimulation::ScalarSimulationprivate
volume_at(std::size_t) constSimulation::ScalarSimulationinline
volume_span() constSimulation::ScalarSimulationinline
volumes_inverseSimulation::ScalarSimulationprivate
~ScalarSimulation()=defaultSimulation::ScalarSimulation