simulation_parameters.hpp

#ifndef __SIMULATION_PARAMETERS_HPP__
#define __SIMULATION_PARAMETERS_HPP__
 
#include <cstddef>
#include <cstdint>
#include <optional>
#include <ostream>
#include <string>
#include <vector>
 
namespace Core
{

  struct UserControlParameters
  {
 
    double biomass_initial_concentration; 
    double final_time;        
    double delta_time;        
    uint64_t number_particle; 
    int32_t n_thread;         
    uint32_t number_exported_result; 
    bool recursive;                  
    bool force_override;  
    bool load_serde;      
    bool save_serde;      
    bool uniform_mc_init; 
    std::string
        initialiser_path;   
    std::string model_name; 
    std::string
        results_file_name;     
    std::string cma_case_path; 
    std::optional<std::string>
        serde_file; 

    static UserControlParameters m_default();
  };
 
  std::ostream& operator<<(std::ostream& stream,
                           const UserControlParameters& params);
 
  struct SimulationParameters
  {
    double d_t;
    size_t n_species;
    std::vector<std::string> flow_files;
    uint64_t number_particle;
    bool verbose;
    size_t n_different_maps;
    size_t n_compartments;
    bool is_two_phase_flow = true;
    size_t n_per_flowmap;
    std::string results_file_name;
    double t_per_flow_map;
    uint32_t number_exported_result;
    double biomass_initial_concentration;
    double final_time;
    bool save_final_serde;
    bool uniform_mc_init;
    static SimulationParameters m_default();
    static SimulationParameters init(const UserControlParameters& user_params);
  };
 
} // namespace Core
#endif //__SIMULATION_PARAMETERS_HPP__